Spread of Multi-Antibiotic-Resistant Health-Care Pathogens in Hospitals to Treat COVID-19 Patients
https://doi.org/10.31631/2073-3046-2021-20-2-68-73
Abstract
Relevance. The COVID-19 pandemic has led to significant overloads in the work of health systems in many countries, a shortage of beds and staff, which contributes to a decrease in adherence to measures to prevent and control nosocomial infections, which can significantly worsen the course of viral pneumonia. Aim. To assess the possibility of the formation of hospital strains of multidrugresistant microorganisms in hospitals repurposed to provide medical care to patients with COVID-19. Materials and methods. The study included patients with severe and moderate forms of COVID-19 (ICD codes U07.1, U07.2), who were admitted to two large hospitals repurposed for the treatment of this infection. The data of microbiological studies of the biomaterial associated with the respiratory tract (sputum, bronchoalveolar lavage, tracheal aspirates) obtained from 1101 patients from May to January 2021 were analyzed using a combination of molecular genetic methods (RAPD-PCR, detection of integrons and the carbapenemase gene bla NDM.), and molecular typing of carbapenem-resistant strains of Klebsiella pneumoniae and Acinetobacter baumannii was carried out. Results. It was found that carbapenem resistant gram-negative bacteria predominate in the structure of the nosocomial microbiota of the respiratory tract of patients with COVID-19 in both hospitals. Based on molecular typing made the wide distribution of several genetic lines of integron-positive carbapenem resistant Klebsiella pneumoniae and Acinetobacter baumannii was detected. Conclusions. The COVID-19 pandemic has exacerbated the spread and circulation of bacteria with multiple antibiotic resistance in hospitals. This study has demonstrated the possibility of the formation of hospital strains of nosocomial infections in COVID-19 hospitals, which justifies the need to improve infection control measures in the context of a new coronavirus infection pandemic.
About the Authors
A. E. GoncharovRussian Federation
Artemy E. Goncharov, Dr. Sci. (Med.), DSc, Head of laboratory of functional genomics and proteomics of microorganisms. Head of Laboratory of Innovative Methods of Microbiological Monitoring, Scientific and educational center «Molecular bases of interaction of microorganisms and human» of the world-class research center «Center for personalized Medicine» FSBSI «IEM», (St. Petersburg, Akademika Pavlova Street, 12), Professor at the Department of Epidemiology, Parasitology and Disinfectology of North-Western State Medical University named after I. I. Mechnikov (Saint-Petersburg, Kirochnaya Street, 41), Associate Professor of the Department of Fundamental Problems of Medicine and Medical Technologies of the Federal State Budgetary Educational Institution of Higher Education Saint-Petersburg State University (Saint-Petersburg, Universitetskaya emb., 7-9)
L. P. Zueva
Russian Federation
Ludmila P. Zueva, Dr. Sci. (Med.), Head and Professor of the Department of Epidemiology, Parasitology and Disinfectology
Saint-Petersburg, Kirochnaya Street , 41
A. S. Mokhov
Russian Federation
Alexey S. Mokhov, PhD student of departament of Epidemiology, Parasitology and Disinfectology of North-Western State Medical University named after I. I. Mechnikov (Saint-Petersburg, Kirochnaya Street, 41), bacteriologist at City Mariinsky Hospital (SaintPetersburg, Liteyny prospert, 56), Researcher, Laboratory of Innovative Methods of Microbiological Monitoring, Scientific and educational center «Molecular bases of interaction of microorganisms and human» of the worldclass research center «Center for personalized Medicine» FSBSI «IEM», (St. Petersburg, Akademika Pavlova Street, 12)
V. V. Kolodzhieva
Russian Federation
Victoria V. Kolodzhieva, Cand. Sci. (Med.), Associate Professor at the Department of Epidemiology, Parasitology and Disinfectology
Saint-Petersburg, Kirochnaya Street, 41
A. A. Meltser
Russian Federation
Alexandra А. Meltser, bacteriologist at City Mariinsky Hospital
Saint-Petersburg, Liteyny prospert, 56
M. V. Smirnova
Russian Federation
Marina V. Smirnova, Head of bacteriological laboratory
Saint-Petersburg, Liteyny prospert, 56
T. V. Khavlina
Russian Federation
Tatyana V. Khavlina, student
Saint-Petersburg, Kirochnaya Street, 41
E. A. Orishak
Russian Federation
Elena A. Orishak, Cand. Sci. (Med.), Associate Professor, Department of Microbiology
Saint-Petersburg, Kirochnaya Street, 41
References
1. Li R., Rivers C., Tan Q., et al. Estimated Demand for US Hospital Inpatient and Intensive Care Unit Beds for Patients With COVID-19 Based on Comparisons With Wuhan and Guangzhou, China. JAMA Netw. Open. 2020;3:e208297. doi: 10.1001/jamanetworkopen.2020.8297.
2. Rawson T.M., Moore L.S.P., Castro-Sanchez E., et al. COVID-19 and the potential long-term impact on antimicrobial resistance. J. Antimicrob. Chemother. 2020;75:1681–1684. doi: 10.1093/jac/dkaa194.
3. Beadling C, Slifka MK. How do viral infections predispose patients to bacterial infections? Curr Opin Infect Dis. 2004;17(3):185–91. doi: 10.1097/00001432-200406000-00003.
4. Metzger DW, Keer Sun. Immune dysfunction and bacterial coinfections following influenza. Journal of immunology. 2013;191(5):2047–52. doi:10.4049/jimmunol.1301152.
5. Rawson T.M., Moore L.S.P., Castro-Sanchez E., et al. COVID-19 and the potential long-term impact on antimicrobial resistance. J. Antimicrob. Chemother 2020;75:1681–1684. doi: 10.1093/jac/dkaa194.
6. Nieuwlaat R., Mbuagbaw L., Mertz D., et al. COVID-19 and Antimicrobial Resistance: Parallel and Interacting Health Emergencies. Clin. Infect. Dis. 2020. doi: 10.1093/cid/ciaa773.
7. Clancy C.J., Nguyen M.H. COVID-19, superinfections and antimicrobial development: What can we expect? Clin. Infect. Dis. 2020. doi: 10.1093/cid/ciaa524.
8. The European Committee on Antimicrobial Susceptibility Testing. Breakpoint tables for interpretation of MICs and zone diameters. Version 11.0, 2021. Available at: http://www.eucast.org.
9. Solomenny A.P., Maksimov A.YU. Saralov A.I., et al. Poyavleniye integron-pozitivnogo polirezistentnogo shtamma Acinetobacter baumannii v rossiyskikh statsionarakh. Zhurn. mikrobiol. epidemiol. immunobiol. 2008; №4:89–91 (In Russ.).
10. Espinal, P., Fugazza, G., López, Y., et al. Dissemination of an NDM-2-producing Acinetobacter baumannii clone in an Israeli rehabilitation center. Antimicrobial agents and chemotherapy. 2011;55(11):5396–5398. https://doi.org/10.1128/AAC.00679-11.
11. Solomenny A, Goncharov A, Zueva L. Extensively drug-resistant Acinetobacter baumannii belonging to the international clonal lineage I in a Russian burn intensive care unit. Int J Antimicrob Agents. 2015;45(5):525–8. doi: 10.1016/j.ijantimicag.2014.10.017.
12. Taggar G, Attiq Rheman M, Boerlin P, et al. Molecular Epidemiology of Carbapenemases in Enterobacteriales from Humans, Animals, Food and the Environment. Antibiotics. 2020 ;9(10):693. doi: 10.3390/antibiotics9100693.
13. Nowak P, Paluchowska P. Acinetobacter baumannii: biology and drug resistance - role of carbapenemases. Folia Histochem Cytobiol. 2016;54(2):61–74. doi: 10.5603/FHC.a2016.0009.
14. Kerneis S., Lucet J.C. Controlling the Difusion of Multidrug-Resistant Organisms in Intensive Care Units. Semin. Respir. Crit. Care Med. 2019;40:558–568. doi: 10.1055/s-0039-1696980.
15. Grundmann H., Hahn A., Ehrenstein B., et al. Detection of cross-transmission of multiresistant Gram-negative bacilli and Staphylococcus aureus in adult intensive care units by routine typing of clinical isolates. Clin. Microbiol. Infect. 1999;5:355–363. doi: 10.1111/j.1469-0691.1999.tb00154.x.
16. Chetchotisakd P., Phelps C.L., Hartstein A.I. Assessment of bacterial cross-transmission as a cause of infections in patients in intensive care units. Clin. Infect. Dis. 1994;18:929–937. doi: 10.1093/clinids/18.6.929.
Review
For citations:
Goncharov A.E., Zueva L.P., Mokhov A.S., Kolodzhieva V.V., Meltser A.A., Smirnova M.V., Khavlina T.V., Orishak E.A. Spread of Multi-Antibiotic-Resistant Health-Care Pathogens in Hospitals to Treat COVID-19 Patients. Epidemiology and Vaccinal Prevention. 2021;20(2):68-73. (In Russ.) https://doi.org/10.31631/2073-3046-2021-20-2-68-73